| (State or other jurisdiction of incorporation) | (Commission File Number) | (IRS Employer Identification No.) | ||||||||||||
| Written communications pursuant to Rule 425 under the Securities Act (17 CFR 230.425) | |||||
| Soliciting material pursuant to Rule 14a-12 under the Exchange Act (17 CFR 240.14a-12) | |||||
| Pre-commencement communications pursuant to Rule 14d-2(b) under the Exchange Act (17 CFR 240.14d-2(b)) | |||||
| Pre-commencement communications pursuant to Rule 13e-4(c) under the Exchange Act (17 CFR 240.13e-4(c)) | |||||
| Title of each class | Trading Symbol(s) | Name of each exchange on which registered | ||||||||||||
| Exhibit Number | Description | |||||||
| 99.1 | ||||||||
| 104 | Cover Page Interactive Data File (embedded within the Inline XBRL) | |||||||
| GINKGO BIOWORKS HOLDINGS, INC. | ||||||||
| Date: November 8, 2023 | By: | /s/ Mark Dmytruk | ||||||
| Name: | Mark Dmytruk | |||||||
| Title: | Chief Financial Officer | |||||||

| Ginkgo Bioworks Holdings, Inc. | ||||||||||||||
| Condensed Consolidated Balance Sheets | ||||||||||||||
| (in thousands, except per share data, unaudited) | ||||||||||||||
| As of September 30, 2023 | As of December 31, 2022 | |||||||||||||
| Assets | ||||||||||||||
| Current assets: | ||||||||||||||
Cash and cash equivalents | $ 1,049,244 | $ 1,315,792 | ||||||||||||
Accounts receivable, net | 61,897 | 80,907 | ||||||||||||
Accounts receivable - related parties | 1,246 | 1,558 | ||||||||||||
Inventory, net | 70 | 4,364 | ||||||||||||
Prepaid expenses and other current assets | 29,389 | 47,458 | ||||||||||||
Total current assets | 1,141,846 | 1,450,079 | ||||||||||||
| Property, plant and equipment, net | 201,595 | 314,773 | ||||||||||||
| Operating lease right-of-use assets | 341,614 | 400,762 | ||||||||||||
| Investments | 84,970 | 112,188 | ||||||||||||
| Equity method investments | 1,120 | 1,543 | ||||||||||||
| Intangible assets, net | 100,168 | 111,041 | ||||||||||||
| Goodwill | 58,057 | 60,210 | ||||||||||||
| Other non-current assets | 97,022 | 88,725 | ||||||||||||
Total assets | $ 2,026,392 | $ 2,539,321 | ||||||||||||
| Liabilities and Stockholders’ Equity | ||||||||||||||
| Current liabilities: | ||||||||||||||
Accounts payable | $ 10,753 | $ 10,451 | ||||||||||||
Deferred revenue | 42,762 | 47,817 | ||||||||||||
Accrued expenses and other current liabilities | 114,947 | 114,694 | ||||||||||||
Total current liabilities | 168,462 | 172,962 | ||||||||||||
| Non-current liabilities: | ||||||||||||||
Deferred revenue, net of current portion | 170,011 | 174,767 | ||||||||||||
Operating lease liabilities, non-current | 403,662 | 413,256 | ||||||||||||
Warrant liabilities | 12,255 | 10,868 | ||||||||||||
Other non-current liabilities | 19,319 | 31,191 | ||||||||||||
Total liabilities | 773,709 | 803,044 | ||||||||||||
| Commitments and contingencies | ||||||||||||||
| Stockholders’ equity: | ||||||||||||||
| Preferred stock, $0.0001 par value | — | — | ||||||||||||
| Common stock, $0.0001 par value | 198 | 190 | ||||||||||||
| Additional paid-in capital | 6,334,218 | 6,136,378 | ||||||||||||
| Accumulated deficit | (5,078,834) | (4,397,659) | ||||||||||||
| Accumulated other comprehensive loss | (2,899) | (2,632) | ||||||||||||
| Total stockholders’ equity | 1,252,683 | 1,736,277 | ||||||||||||
| Total liabilities and stockholders’ equity | $ 2,026,392 | $ 2,539,321 | ||||||||||||
| Ginkgo Bioworks Holdings, Inc. | |||||||||||||||||||||||||||||
| Condensed Consolidated Statements of Operations and Comprehensive Loss | |||||||||||||||||||||||||||||
| (in thousands, except per share data, unaudited) | |||||||||||||||||||||||||||||
| Three Months Ended September 30, | Nine Months Ended September 30, | ||||||||||||||||||||||||||||
| 2023 | 2022 (as adjusted*) | 2023 | 2022 (as adjusted*) | ||||||||||||||||||||||||||
| Cell Engineering revenue | $ 37,176 | $ 24,679 | $ 116,555 | $ 90,409 | |||||||||||||||||||||||||
| Biosecurity revenue: | |||||||||||||||||||||||||||||
| Product | 6,495 | 5,190 | 28,949 | 23,024 | |||||||||||||||||||||||||
| Service | 11,759 | 36,529 | 71,196 | 265,988 | |||||||||||||||||||||||||
| Total revenue | 55,430 | 66,398 | 216,700 | 379,421 | |||||||||||||||||||||||||
| Costs and operating expenses: | |||||||||||||||||||||||||||||
| Cost of Biosecurity product revenue | 906 | 2,660 | 7,481 | 13,199 | |||||||||||||||||||||||||
| Cost of Biosecurity service revenue | 6,017 | 21,995 | 39,913 | 160,799 | |||||||||||||||||||||||||
Research and development (1) | 156,662 | 261,460 | 463,583 | 875,095 | |||||||||||||||||||||||||
General and administrative (1) | 82,028 | 435,221 | 295,802 | 1,308,416 | |||||||||||||||||||||||||
| Impairment of lease assets | 96,210 | — | 96,210 | — | |||||||||||||||||||||||||
| Total operating expenses | 341,823 | 721,336 | 902,989 | 2,357,509 | |||||||||||||||||||||||||
| Loss from operations | (286,393) | (654,938) | (686,289) | (1,978,088) | |||||||||||||||||||||||||
| Other (expense) income: | |||||||||||||||||||||||||||||
| Interest income, net | 15,020 | 6,380 | 43,914 | 8,821 | |||||||||||||||||||||||||
| Loss on equity method investments | — | (22,711) | (1,516) | (53,764) | |||||||||||||||||||||||||
| Loss on investments | (36,324) | (1,758) | (44,815) | (39,981) | |||||||||||||||||||||||||
| Change in fair value of warrant liabilities | 1,891 | (12,445) | (1,387) | 96,099 | |||||||||||||||||||||||||
| Gain on deconsolidation of subsidiaries | — | 15,989 | — | 31,889 | |||||||||||||||||||||||||
| Other income (expense), net | 2,893 | (676) | 9,045 | 1,473 | |||||||||||||||||||||||||
| Total other (expense) income, net | (16,520) | (15,221) | 5,241 | 44,537 | |||||||||||||||||||||||||
| Loss before income taxes | (302,913) | (670,159) | (681,048) | (1,933,551) | |||||||||||||||||||||||||
| Income tax (benefit) provision | (22) | (28) | 127 | (257) | |||||||||||||||||||||||||
| Net loss | (302,891) | (670,131) | (681,175) | (1,933,294) | |||||||||||||||||||||||||
| Loss attributable to non-controlling interest | — | — | — | (3,833) | |||||||||||||||||||||||||
| Net loss attributable to Ginkgo Bioworks Holdings, Inc. stockholders | $ (302,891) | $ (670,131) | $ (681,175) | $ (1,929,461) | |||||||||||||||||||||||||
| Net loss per share attributable to Ginkgo Bioworks Holdings, Inc. common stockholders, basic and diluted | $ (0.16) | $ (0.41) | $ (0.35) | $ (1.19) | |||||||||||||||||||||||||
| Weighted average common shares outstanding, basic and diluted | 1,950,814 | 1,630,911 | 1,933,202 | 1,619,790 | |||||||||||||||||||||||||
| Comprehensive loss: | |||||||||||||||||||||||||||||
| Net loss | $ (302,891) | $ (670,131) | $ (681,175) | $ (1,933,294) | |||||||||||||||||||||||||
| Other comprehensive loss: | |||||||||||||||||||||||||||||
| Foreign currency translation adjustment | (1,599) | (2,414) | (267) | (6,195) | |||||||||||||||||||||||||
| Total other comprehensive loss | (1,599) | (2,414) | (267) | (6,195) | |||||||||||||||||||||||||
| Comprehensive loss | $ (304,490) | $ (672,545) | $ (681,442) | $ (1,939,489) | |||||||||||||||||||||||||
| * As adjusted to reflect the impact of the adoption of Accounting Standards Codification Topic 842, Leases (“ASC 842”). See Note 1 to the condensed consolidated financial statements contained in Part I, Item 1 of this Quarterly Report on Form 10-Q for a summary of the adjustments. | |||||||||||||||||||||||||||||
| (1) | R&D and G&A expenses included a significant charge for stock-based compensation expense as a result of the modification of the vesting terms of RSUs and all related earnout shares. Total stock-based compensation expense, inclusive of employer payroll taxes, was allocated as follows (in thousands): | ||||||||||||||||||||||||||||
| Three Months Ended September 30, | Nine Months Ended September 30, | |||||||||||||||||||||||||
| (in thousands) | 2023 | 2022 (as adjusted*) | 2023 | 2022 (as adjusted*) | ||||||||||||||||||||||
| Research and development | $ 33,976 | $ 187,019 | $ 122,086 | $ 670,650 | ||||||||||||||||||||||
| General and administrative | 19,671 | 376,366 | 69,238 | 1,159,040 | ||||||||||||||||||||||
| Total | $ 53,647 | $ 563,385 | $ 191,324 | $ 1,829,690 | ||||||||||||||||||||||
| Ginkgo Bioworks Holdings, Inc. | ||||||||||||||
| Condensed Consolidated Statements of Cash Flows | ||||||||||||||
| (in thousands, unaudited) | ||||||||||||||
| Nine Months Ended September 30, | ||||||||||||||
| 2023 | 2022 (as adjusted*) | |||||||||||||
| Cash flows from operating activities: | ||||||||||||||
| Net loss | $ (681,175) | $ (1,933,294) | ||||||||||||
| Adjustments to reconcile net loss to net cash used in operating activities: | ||||||||||||||
Depreciation and amortization | 57,670 | 26,885 | ||||||||||||
Stock-based compensation | 187,047 | 1,822,472 | ||||||||||||
Loss on investments and equity method investments | 46,331 | 93,745 | ||||||||||||
Change in fair value of warrant liabilities | 1,387 | (96,099) | ||||||||||||
Change in fair value of contingent consideration liability | 10,217 | 58 | ||||||||||||
Gain on deconsolidation of subsidiaries | — | (31,889) | ||||||||||||
Impairment of long-lived assets | 121,404 | — | ||||||||||||
Non-cash customer consideration | (884) | (18,139) | ||||||||||||
Non-cash lease expense | 24,635 | 11,877 | ||||||||||||
Non-cash in-process research and development | 3,981 | 1,162 | ||||||||||||
Other non-cash activity | 3,937 | 4,602 | ||||||||||||
Changes in operating assets and liabilities: | ||||||||||||||
Accounts receivable | 21,168 | 20,521 | ||||||||||||
Prepaid expenses and other current assets | 13,557 | 5,230 | ||||||||||||
Operating lease right-of-use assets | 9,277 | — | ||||||||||||
Other non-current assets | (2,733) | 144 | ||||||||||||
Accounts payable, accrued expenses and other current liabilities | (4,822) | (11,852) | ||||||||||||
Deferred revenue, current and non-current | (29,382) | (35,365) | ||||||||||||
Operating lease liabilities, current and non-current | (18,310) | (7,807) | ||||||||||||
Other non-current liabilities | (974) | 82 | ||||||||||||
Net cash used in operating activities | (237,669) | (147,667) | ||||||||||||
| Cash flows from investing activities: | ||||||||||||||
| Purchase of convertible note | — | (10,000) | ||||||||||||
| Purchases of property and equipment | (37,355) | (26,626) | ||||||||||||
| Proceeds from sale of equipment | 3,000 | 110 | ||||||||||||
| Purchase of investment in equity securities | — | (3,691) | ||||||||||||
| Deconsolidation of subsidiaries - cash | — | (55,721) | ||||||||||||
| Other | 336 | (1,206) | ||||||||||||
Net cash used in investing activities | (34,019) | (97,134) | ||||||||||||
| Cash flows from financing activities: | ||||||||||||||
| Principal payments on finance leases | (977) | (912) | ||||||||||||
| Contingent consideration payment | (1,082) | (521) | ||||||||||||
| Other | (525) | (993) | ||||||||||||
Net cash used in financing activities | (2,584) | (2,426) | ||||||||||||
| Effect of foreign exchange rates on cash and cash equivalents | (690) | (191) | ||||||||||||
Net decrease in cash, cash equivalents and restricted cash | (274,962) | (247,418) | ||||||||||||
| Cash and cash equivalents, beginning of period | 1,315,792 | 1,550,004 | ||||||||||||
| Restricted cash, beginning of period | 53,789 | 42,924 | ||||||||||||
| Cash, cash equivalents and restricted cash, beginning of period | 1,369,581 | 1,592,928 | ||||||||||||
| Cash and cash equivalents, end of period | 1,049,244 | 1,302,603 | ||||||||||||
| Restricted cash, end of period | 45,375 | 42,907 | ||||||||||||
| Cash, cash equivalents and restricted cash, end of period | $ 1,094,619 | $ 1,345,510 | ||||||||||||
| Ginkgo Bioworks Holdings, Inc. | |||||||||||||||||||||||||||||
| Selected Non-GAAP Financial Measures | |||||||||||||||||||||||||||||
| (in thousands, unaudited) | |||||||||||||||||||||||||||||
| Three Months Ended September 30, | Nine Months Ended September 30, | ||||||||||||||||||||||||||||
| 2023 | 2022 (as adjusted*) | 2023 | 2022 (as adjusted*) | ||||||||||||||||||||||||||
| Net loss attributable to Ginkgo Bioworks Holdings, Inc. stockholders | $ (302,891) | $ (670,131) | $ (681,175) | $ (1,929,461) | |||||||||||||||||||||||||
| Interest income, net | (15,020) | (6,380) | (43,914) | (8,821) | |||||||||||||||||||||||||
| Income tax (benefit) provision | (22) | (28) | 127 | (257) | |||||||||||||||||||||||||
| Depreciation and amortization | 21,060 | 8,917 | 57,670 | 26,885 | |||||||||||||||||||||||||
| EBITDA | (296,873) | (667,622) | (667,292) | (1,911,654) | |||||||||||||||||||||||||
Stock-based compensation (1) | 53,647 | 563,385 | 191,324 | 1,829,690 | |||||||||||||||||||||||||
Loss on equity method investments (2) | — | 22,711 | 1,516 | 52,927 | |||||||||||||||||||||||||
| Loss on investments | 36,324 | 1,758 | 44,815 | 39,981 | |||||||||||||||||||||||||
| Change in fair value of warrant liabilities | (1,891) | 12,445 | 1,387 | (96,099) | |||||||||||||||||||||||||
| Gain on deconsolidation of subsidiaries | — | (15,989) | — | (31,889) | |||||||||||||||||||||||||
Merger and acquisition related expenses (3) | 12,253 | 12,017 | 47,108 | 20,184 | |||||||||||||||||||||||||
Impairment of long-lived assets (4) | 112,403 | — | 121,404 | — | |||||||||||||||||||||||||
| Change in fair value of convertible notes | 317 | (561) | 121 | (229) | |||||||||||||||||||||||||
| Adjusted EBITDA | $ (83,820) | $ (71,856) | $ (259,617) | $ (97,089) | |||||||||||||||||||||||||
| * As adjusted to reflect the impact of the adoption of ASC 842. See Note 1 to the condensed consolidated financial statements contained in Part I, Item 1 of this Quarterly Report on Form 10-Q for a summary of the adjustments. | |||||||||||||||||||||||||||||
| (1) | For the three and nine months ended September 30, 2023, includes $1.1 million and $0.2 million, respectively, in employer payroll taxes. For the three and nine months ended September 30, 2022, includes $4.3 million and $7.2 million, respectively, in employer payroll taxes. | ||||||||||||||||||||||||||||
| (2) | Represents losses on equity method investments under the hypothetical liquidation at book value method, net of losses attributable to non-controlling interests. | ||||||||||||||||||||||||||||
| (3) | Represents transaction and integration costs directly related to mergers and acquisitions including (i) due diligence, legal, consulting and accounting fees associated with acquisitions, (ii) post-acquisition employee retention bonuses and severance payments, (iii) the fair value adjustments to contingent consideration liabilities resulting from acquisitions, (iv) acquired intangible assets expensed as in-process research and development associated with asset acquisitions and (v) costs associated with the Zymergen bankruptcy. | ||||||||||||||||||||||||||||
| (4) | For the three months ended September 30, 2023, includes $16.2 million impairment loss on lab equipment and $96.2 million impairment loss on a right-of-use asset and the related leasehold improvements associated with an exited Zymergen leased facility. For the nine months ended September 30, 2023, includes $25.2 million impairment loss on lab equipment and $96.2 million impairment loss on a right-of-use asset and the related leasehold improvements associated with an exited Zymergen leased facility. | ||||||||||||||||||||||||||||
| Ginkgo Bioworks Holdings, Inc. | |||||||||||||||||||||||
| Segment Information | |||||||||||||||||||||||
| (in thousands, unaudited) | |||||||||||||||||||||||
| Three Months Ended September 30, | Nine Months Ended September 30, | ||||||||||||||||||||||
| 2023 | 2022 (as adjusted*) | 2023 | 2022 (as adjusted*) | ||||||||||||||||||||
| Revenue: | |||||||||||||||||||||||
Cell Engineering | $ 37,176 | $ 24,679 | $ 116,555 | $ 90,409 | |||||||||||||||||||
Biosecurity | 18,254 | 41,719 | 100,145 | 289,012 | |||||||||||||||||||
Total revenue | 55,430 | 66,398 | 216,700 | 379,421 | |||||||||||||||||||
| Segment cost of revenue: | |||||||||||||||||||||||
Biosecurity | 6,923 | 24,655 | 47,394 | 173,998 | |||||||||||||||||||
| Segment research and development expense: | |||||||||||||||||||||||
Cell Engineering | 90,889 | 65,589 | 275,494 | 177,948 | |||||||||||||||||||
Biosecurity | 313 | 387 | 1,408 | 1,347 | |||||||||||||||||||
Total segment research and development expense | 91,202 | 65,976 | 276,902 | 179,295 | |||||||||||||||||||
| Segment general and administrative expense: | |||||||||||||||||||||||
Cell Engineering | 42,617 | 41,606 | 155,216 | 104,900 | |||||||||||||||||||
Biosecurity | 12,207 | 17,039 | 42,862 | 42,683 | |||||||||||||||||||
Total segment general and administrative expense | 54,824 | 58,645 | 198,078 | 147,583 | |||||||||||||||||||
| Segment operating (loss) income: | |||||||||||||||||||||||
Cell Engineering | (96,330) | (82,516) | (314,155) | (192,439) | |||||||||||||||||||
Biosecurity | (1,189) | (362) | 8,481 | 70,984 | |||||||||||||||||||
Total segment operating loss | (97,519) | (82,878) | (305,674) | (121,455) | |||||||||||||||||||
| Operating expenses not allocated to segments: | |||||||||||||||||||||||
Stock-based compensation (1) | 53,647 | 563,385 | 191,324 | 1,829,690 | |||||||||||||||||||
Depreciation and amortization | 21,060 | 8,917 | 57,670 | 26,885 | |||||||||||||||||||
Impairment of long-lived assets | 112,403 | — | 121,404 | — | |||||||||||||||||||
| Change in fair value of contingent consideration liability | 1,764 | (242) | 10,217 | 58 | |||||||||||||||||||
Loss from operations | $ (286,393) | $ (654,938) | $ (686,289) | $ (1,978,088) | |||||||||||||||||||
| * As adjusted to reflect the impact of the adoption of ASC 842. See Note 1 to the condensed consolidated financial statements contained in Part I, Item 1 of this Quarterly Report on Form 10-Q for a summary of the adjustments. | |||||||||||||||||||||||
(1)Includes $1.1 million and $0.2 million in employer payroll taxes for the three months ended September 30, 2023 and 2022, respectively, and $4.3 million and $7.2 million in employer payroll taxes for the nine months ended September 30, 2023 and 2022, respectively. | |||||||||||||||||||||||